Appendix D: kernel data structures

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There are two major data structures that are used throughout Spinach: spin_system, which contains spin system topology, interaction and basis set information, and parameters, which contains pulse sequence parameters. The spin_system structure is generated by the create.m function and updated by the basis.m function during the initialization stage.

Top level overview

Top level subfields of the spin_system data structure.

Composition information

Spin system composition information subfield of the spin_system object.

Interaction information

Interaction specification subfield of the spin_system data structure.

Relaxation theory

Relaxation theory parameters subfield of the spin_system data structure.

Chemical reactions

Chemical process specification subfield of the spin_system data structure.

Basis set information

Basis set information subfield of the spin_system data structure.

Internal settings

Internal configuration settings subfield of the spin_system data structure.

Optimal control settings

Optimal control settings subfield of the spin_system data structure.

Hamiltonian descriptor

Hamiltonian descriptor table used internally by hamiltonian.m function.