Difference between revisions of "Molplot.m"
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xyz - Cartesian coordinates, as Nx3 matrix, in | xyz - Cartesian coordinates, as Nx3 matrix, in | ||
Angstroms | Angstroms | ||
| − | + | ||
conmatrix - NxN connectivity matrix indicating chemical | conmatrix - NxN connectivity matrix indicating chemical | ||
bonds that should be drawn as sticks. If an | bonds that should be drawn as sticks. If an | ||
Revision as of 11:55, 29 December 2018
Plots a stick representation of a molecule from Cartesian coordinates supplied.
Syntax
molplot(xyz,conmatrix)
Arguments
xyz - Cartesian coordinates, as Nx3 matrix, in
Angstroms
conmatrix - NxN connectivity matrix indicating chemical
bonds that should be drawn as sticks. If an
empty vector is supplied, 1.6 Angstrom cut-
off distance is used
Outputs
this function creates a figure
Examples
The figure below is produced by examples/nmr_paramag/s50c_density.m example file. The protein structure is drawn using molplot.m function.
See also
plot_1d.m, plot_2d.m, plot_3d.m, volplot.m, mri_2d_plot.m, hfc_display.m, cst_display.m
Version 2.3, authors: Ilya Kuprov
