Powder.m

Static powder interface to pulse sequences. Generates a Liouvillian superoperator, the initial state and the coil state, then passes them on to the pulse sequence function.

Syntax

[answer,sph_grid]=powder(spin_system,pulse_sequence,parameters,assumptions)

Arguments

pulse_sequence - pulse sequence function handle. See the

                      experiments directory for the list of
                      pulse sequences that ship with Spinach.
 
 parameters.spins   - a cell array giving the spins that the
                      pulse sequence works on, in the order
                      of channels, e.g. {'1H','13C'}

 parameters.offset  - a cell array giving transmitter offsets
                      in Hz on each of the spins listed in
                      parameters.spins

 parameters.grid    - name of the spherical averaging grid
                      file (see the grids directory in the
                      kernel).

 parameters.rframes - rotating frame specification, e.g.
                      {{'13C',2},{'14N,3}} requests second
                      order rotating frame transformation
                      with respect to carbon-13 and third
                      order rotating frame transformation
                      with respect to nitrogen-14. When
                      this option is used, the assumptions
                      on the respective spins should be
                      laboratory frame.

 parameters.needs   - a cell array of strings specifying ad-
                      ditional information required by the
                      sequence:

                      'zeeman_op' - Zeeman part of the Hami-
                      ltonian in the laboratory frame, to be
                      placed into parameters.hzeeman and sent
                      to the pulse sequence

                      'aniso_eq' - thermal equilibrium is re-
                      computed using the full anisotropic Ha-
                      miltonian at each orientation, and sent
                      to pulse sequence via parameters.rho0
  
  parameters.rho0   - initial state; may be a function handle
                      that depends on the three Euler angles
                      in ZYZ active convention

  parameters.serial - if set to true, disables automatic pa-
                      rallelisation

  parameters.sum_up - if set to false, causes the pulse sequ-
                      ence output at each orientation to be
                      returned instead of the powder average
 
  parameters.*      - additional subfields may be required by
                      the pulse sequence - check its documen-
                      tation page 

  assumptions       - context-specific assumptions ('nmr', 'epr',
                      'labframe', etc.) - see the pulse sequence
                      header for information on this setting.

Outputs

answer - powder average of whatever it is that the pulse

              sequence returns; if parameters.sum_up is set to
              false, a cell array of outputs at each orienta-
              tion is returned

  sph_grid -  powder averaging grid data structure with three
              Euler angles and weights for each point

Note: THIS IS FOR STATIC POWDERS - use singlerot for MAS simulations.

Note: arbitrary order rotating frame transformation is supported, inc-
      luding infinite order. See the header of rotframe.m for further
      information.

Note: the function supports parallel processing via Matlab's Distri-
      buted Computing Toolbox - different system orientations are eva-
      luated on different labs.

ledwards@cbs.mpg.de
ilya.kuprov@weizmann.ac.il

Notes

1. THIS IS FOR STATIC POWDERS - use singlerot.m for MAS simulations.
2. Arbitrary order rotating frame transformation is supported, including infinite order. See the header of rotframe.m for further information.
3. The function supports parallel processing via Matlab's Distributed Computing Toolbox - different system orientations are evaluated on different labs.

See also

Kernel contexts

Solid state NMR experiments

ESR experiments

DNP experiments

Version 2.8, authors: Ilya Kuprov, Luke Edwards