Deer 4p soft deer.m
Four-pulse DEER/PELDOR pulse sequence. The sequence uses soft pulses computed with the Fokker-Planck formalism. Syntax:
deer=deer_4p_soft_deer(spin_system,parameters,H,R,K)
where H is the Hamiltonian commutation superoperator, R is the relaxation superoperator and K is the chemical kinetics super- operator. The following parameters are required:
parameters.pulse_frq - frequencies for the
four pulses, Hz
parameters.pulse_pwr - power levels for the four
pulses, Hz
parameters.pulse_dur - durations for the four
pulses, seconds
parameters.pulse_phi - initial phases for the four
pulses, radians
parameters.pulse_rnk - Fokker-Planck ranks for the
four pulses
parameters.p1_p2_gap - time between the end of the
first and the start of the
second pulse, seconds
parameters.p2_p4_gap - time between the end of the
second the start of the third
pulse, seconds
parameters.p3_nsteps - number of third pulse posi-
tions in the interval between
the first echo and the fourth
pulse
parameters.echo_time - time to sample around the ex-
pected second echo position
parameters.echo_npts - number of points in the second
echo discretization
parameters.rho0 - initial state
parameters.coil - detection state
parameters.method - soft puse propagation method,
'expv' for Krylov propagation,
'expm' for exponential propa-
gation, 'evolution' for Spin-
ach evolution function