Difference between revisions of "Spendosy.m"

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Ultrafast DOSY pulse sequence. Syntax:
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{{DISPLAYTITLE:spendosy.m}} __NOTOC__
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Ultrafast DOSY pulse sequence.  
  
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            fid=spendosy(spin_system,parameters,H,R,K,G,F)
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==Syntax==
  
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The following parameters are required
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    fid=spendosy(spin_system,parameters,H,R,K,G,F)
  
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parameters.dims          size of the sample in m
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==Parameters==
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    parameters.dims          size of the sample in m
 
   
 
   
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parameters.npts          number of spin packets
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    parameters.npts          number of spin packets
 
   
 
   
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parameters.spins          nuclei on which the sequence runs
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    parameters.spins          nuclei on which the sequence runs
 
   
 
   
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parameters.deltat        timestep for acquisition
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    parameters.deltat        timestep for acquisition
 
   
 
   
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parameters.npoints        number of acquired points for each  
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    parameters.npoints        number of acquired points for each
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                          gradient readout
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                              gradient readout
 
   
 
   
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parameters.nloops        number of loop, where each loop consists of  
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    parameters.nloops        number of loop, where each loop consists of
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                          a positive and a negative readout
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                              a positive and a negative readout
 
   
 
   
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parameters.offset        offset  
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    parameters.offset        offset
 
   
 
   
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parameters.cond          bondary conditions  
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    parameters.cond          bondary conditions
 
   
 
   
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parameters.Ga            acquisition gradient in T/m
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    parameters.Ga            acquisition gradient in T/m
 
   
 
   
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parameters.pulsenpoints  number of points in the pulse shape
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    parameters.pulsenpoints  number of points in the pulse shape
 
   
 
   
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parameters.smfactor      smoothing factor for the pulse
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    parameters.smfactor      smoothing factor for the pulse
 
   
 
   
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parameters.Te            duration of the pulse
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    parameters.Te            duration of the pulse
 
   
 
   
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parameters.Tau            duration extra dephasing gradient
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    parameters.Tau            duration extra dephasing gradient
 
   
 
   
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parameters.BW            bandwidth of the pulse
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    parameters.BW            bandwidth of the pulse
 
   
 
   
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parameters.Ge            encoding gradient in T/m
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    parameters.Ge            encoding gradient in T/m
 
   
 
   
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parameters.chirptype      can be 'wurst' or 'smoothed'
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    parameters.chirptype      can be 'wurst' or 'smoothed'
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parameters.td            diffusion delay
 
 
   
 
   
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H                        Fokker-Planck Hamiltonian
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    parameters.td            diffusion delay, at least
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                              parameters.Tau+parameters.Te
 
   
 
   
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R                         Fokker-Planck relaxation superoperator
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    H                         Fokker-Planck Hamiltonian
 
   
 
   
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K                         Fokker-Planck kinetics superoperator
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    R                         Fokker-Planck relaxation superoperator
 
   
 
   
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G                         Fokker-Planck gradient superoperators
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    K                         Fokker-Planck kinetics superoperator
 
   
 
   
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F                         Fokker-Planck diffusion and flow superoperator
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    G                         Fokker-Planck gradient superoperators
 
   
 
   
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Note: the last five parameters are built automatically by the imaging context function.
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    F                        Fokker-Planck diffusion and flow superoperator
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==Outputs==
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    fid - free induction decay
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==Notes==
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The last five parameters are built automatically by the imaging context function.
  
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==See also==
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[[idosyzs.m]], [[dosy_oneshot.m]], [[psycosy.m]], [[psyche.m]], [[spencosy.m]], [[spendosycosy.m]], [[st_ideal.m]], [[ufmq.m]], [[Built-in_experiments]]
  
 
''Version 1.9, authors: [[Jean-Nicolas Dumez]], [[Ilya Kuprov]], [[Ludmilla Guduff]]''
 
''Version 1.9, authors: [[Jean-Nicolas Dumez]], [[Ilya Kuprov]], [[Ludmilla Guduff]]''

Latest revision as of 08:39, 30 August 2026

Ultrafast DOSY pulse sequence.

Syntax

    fid=spendosy(spin_system,parameters,H,R,K,G,F)

Parameters

    parameters.dims           size of the sample in m

    parameters.npts           number of spin packets

    parameters.spins          nuclei on which the sequence runs

    parameters.deltat         timestep for acquisition

    parameters.npoints        number of acquired points for each
                              gradient readout

    parameters.nloops         number of loop, where each loop consists of
                              a positive and a negative readout

    parameters.offset         offset

    parameters.cond           bondary conditions

    parameters.Ga             acquisition gradient in T/m

    parameters.pulsenpoints   number of points in the pulse shape

    parameters.smfactor       smoothing factor for the pulse

    parameters.Te             duration of the pulse

    parameters.Tau            duration extra dephasing gradient

    parameters.BW             bandwidth of the pulse

    parameters.Ge             encoding gradient in T/m

    parameters.chirptype      can be 'wurst' or 'smoothed'

    parameters.td             diffusion delay, at least
                              parameters.Tau+parameters.Te

    H                         Fokker-Planck Hamiltonian

    R                         Fokker-Planck relaxation superoperator

    K                         Fokker-Planck kinetics superoperator

    G                         Fokker-Planck gradient superoperators

    F                         Fokker-Planck diffusion and flow superoperator

Outputs

    fid - free induction decay

Notes

The last five parameters are built automatically by the imaging context function.

See also

idosyzs.m, dosy_oneshot.m, psycosy.m, psyche.m, spencosy.m, spendosycosy.m, st_ideal.m, ufmq.m, Built-in_experiments

Version 1.9, authors: Jean-Nicolas Dumez, Ilya Kuprov, Ludmilla Guduff